SubtiBank SubtiBank
ypkP [2019-07-03 11:48:06]
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ypkP [2019-07-03 11:48:06]

unknown
locus
BSU21800
pI
8.07
mw
23.12 kDa
protein length
206 aa Sequence Blast
gene length
621 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    2,295,982 2,296,602

    The protein

    Protein family

  • pseudouridine synthase rsuA family (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|9D1DAA5E69DD12FDE0FB33EA0863E0CB214120EC|ypkP]
    description
    (according to [http://dbtbs.hgc.jp/COG/prom/ypkP.html DBTBS]) null
    view in new tab

    genes
    [gene|8B515C789439354F870023E69077D2C1D709E046|ypjP]-[gene|2CB3BAF17F59A858D249619A436EF660CAA58DD5|ypjQ]-[gene|9F9643D51E9ABA537892B19312491697CECDDCCF|thyB]-[gene|B740E971204AC14BA456B8C93A86D4BDC29524FF|dfrA]-[gene|9D1DAA5E69DD12FDE0FB33EA0863E0CB214120EC|ypkP]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A895 (ypkP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/895 NBRP B. subtilis, Japan]
  • BKE21800 ([gene|9D1DAA5E69DD12FDE0FB33EA0863E0CB214120EC|ypkP]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACTAGAAGGCTGTAGCGAA, downstream forward: _UP4_TAAAAAAGCGCAGTCGTGAA
  • BKK21800 ([gene|9D1DAA5E69DD12FDE0FB33EA0863E0CB214120EC|ypkP]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACTAGAAGGCTGTAGCGAA, downstream forward: _UP4_TAAAAAAGCGCAGTCGTGAA